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CONSENSUS SECONDARY STRUCTURE PREDICTION

[Abstract] [NPS@ help] [Original server]

Choose methods :
SOPM (Geourjon and Deleage, 1994) Choose parameters
SOPMA (Geourjon and Deleage, 1995) Choose parameters
HNN (Guermeur, 1997)
MLRC on GOR4, SIMPA96 and SOPMA (Guermeur et al., 1998)
When MLRC is checked GOR4, SOPMA and SIMPA96 predictions are not displayed.
DPM (Deleage and Roux,1987)
DSC (King and Stenberg, 1996)
GOR I (Garnier et al.,1978) Choose parameters
GOR III (Gibrat et al.,1987)
GOR IV (Garnier et al., 1996)
PHD (Rost et al., 1994)
PREDATOR (Argos et al., 1996) Choose parameters
SIMPA96 (Levin et al., 1996)

Sequence name (optional) :

Paste a protein sequence below : help

Output width :


Garnier parameters

Auto calculated

Decision constants Helix Sheet TurnCoil
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PREDATOR parameters

Secondary structure data :
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SOPM parameters

Number of conformational states
Similarity threshold : Window width :
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SOPMA parameters

Number of conformational states
Similarity threshold: Window width :
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User : public Last modification time : Mon Mar 15 15:24:33 2021. Current time : Fri Apr 19 10:18:50 2024